Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831229.1_cds_XP_016504432.1_17870
CDS Infomation

[gene=LOC107822408] [db_xref=GeneID:107822408] [protein=protein NRT1/ PTR FAMILY 4.5-like] [protein_id=XP_016504432.1] [location=complement(join(30734..30948,30983..31638,31732..32303,32604..32821,33041..33119,33224..33226))] [gbkey=CDS]
Sequence

ATGAGAATGTGCAGAGATGTCAACATTGAACCCAAACAACCACCAAGGCTAGGGGGAAAT
AGTGCAACTTTATTTGTATATGCTATGGCGGGGATCGATGTCATGGCTTTCTTCGCAACT
GGTGTGAGCTTGGTGACTTACTTTTATGGATTTATGAACTTCAGCATAACAAAATCAGCC
ACTGCTGTTACAAACTTCATGGGAACAGCATTCATGCTTGCATTATTTGGAGCCTTCCTT
TCAGACACTTACTTGTCCAGATTCAAGACTTGTGTTCTATTTGGCTGTTTTGAAGTTGTT
GGGTATGCACTTCTAGCAGTGCAAGCACATTTCAGGCAACTAAGACCCTTTCCTTGTAAA
GATGTACTCTTGATCCAACTGAATCAATGTCAGTCTGCAAATAAAGGCCAATTGGCAATC
TTATACGTGGGACTTTATCTAGTTGCAATTGGGACCGGTGGAGTTAAAGCAGCTGCACCG
CCTTTGGGAGCTGATCAATATGATGAGAAGGACCCTAAAGAGGCTGCTAAACTATCAAGC
TACTTCAATTGGCTTATGTTCTTCCTCACCACTGGCGCGCTGTTTGGTGTCACATTTATA
GTTTGGATTGGTGAGAATCAGGGATGGGATTGGTCGTTTGCTGTCTGCAGTATTGTAGTA
GGATTGGCAATTCTGTTCCTAACCATGGGGAAATCATTGTACAGAAACAATGTCTCAAAT
GGAAGCCCCCTTACGCGTATTATGCAGGTGTTTTTTGTAGCACTTAGAAACAGAAATCTC
CCTTTGCCAGAGAATGAACATGAGTTACATGAGATTCATGATAAAGAAGCTAGAAACGAT
GCAGAGATTCTTCGAAAAACTGACCAATTCAAGTTTTTGGACCGAGCAACGATAATGAGG
ACTGACCAGAACACATCCACATCAAGTGCACATGGACCGTGGAAACTTTGTGCAGTAACA
CAAGTTGAAGAGACCAAAATTGTAGTCAGAATGCTCCCAATTATATTGAGTACTGTTTTC
ATGAACACTTGTTTGGCTCAGCTCCAAACTTTCACTATCCAACAAAGCACAACAATGAAC
AGAAAAATCCACAAATTTGAAGTTCCAGGGGCTTCAATTCCAGCAATTCCACTACTATTT
ATGATTATCTTGATTCCTATATATGAACGCGTTTTCATTCCAATAGCAAGAAAATTCACA
GGGATTCCAACAGGGATACGACAGCTGCAACGTATAGGTGCTGGCCTAGTACTTTCAGCT
GTGTCAATGGTAGTAGCTGCAATTGTAGAAAAACACCGGAAAACAGTTGCTATTAAGCAC
AGCATGGTTGAAACCACCACTCCATTGCCAATGAGTGTCTTTTGGCTAGGCTATCAATAT
GCAATCTTTGGTTTGGCTGATATGTTTACATTTGTGGGATTGATGGATTTCTTCTATTCA
GAGAGCGCATCAAGCATGAAAGCGCTAAGTACTGCAATTTCTTGGTCTTCACTGGCAATT
GGATACTACACAAGTTCAGTGGTGGTAATGAACAAAGTAAGTGGTGGCTGGTTGGATAAT
AACAACTTGAACAAAGACAAGCTTGATTACTTTTACTGGTTGTTAGCAGGATTGAGTGTG
CTCAATTTCGGGTTTTATTTACTTTGTGCTTCCTGGTATAAATACAAGAAGGTAGATGTG
AATCCAGAAGATGTTGTCCTTAGTAAGGAGGCCACGGGGAAGATTGAGATGAGCATAGTT
TAG

Peptide Sequence

PEP ID

XP_016504432.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 4.5-like [Nicotiana tabacum]
Sequence

MRMCRDVNIEPKQPPRLGGNSATLFVYAMAGIDVMAFFATGVSLVTYFYGFMNFSITKSA
TAVTNFMGTAFMLALFGAFLSDTYLSRFKTCVLFGCFEVVGYALLAVQAHFRQLRPFPCK
DVLLIQLNQCQSANKGQLAILYVGLYLVAIGTGGVKAAAPPLGADQYDEKDPKEAAKLSS
YFNWLMFFLTTGALFGVTFIVWIGENQGWDWSFAVCSIVVGLAILFLTMGKSLYRNNVSN
GSPLTRIMQVFFVALRNRNLPLPENEHELHEIHDKEARNDAEILRKTDQFKFLDRATIMR
TDQNTSTSSAHGPWKLCAVTQVEETKIVVRMLPIILSTVFMNTCLAQLQTFTIQQSTTMN
RKIHKFEVPGASIPAIPLLFMIILIPIYERVFIPIARKFTGIPTGIRQLQRIGAGLVLSA
VSMVVAAIVEKHRKTVAIKHSMVETTTPLPMSVFWLGYQYAIFGLADMFTFVGLMDFFYS
ESASSMKALSTAISWSSLAIGYYTSSVVVMNKVSGGWLDNNNLNKDKLDYFYWLLAGLSV
LNFGFYLLCASWYKYKKVDVNPEDVVLSKEATGKIEMSIV

Transcript Sequence

Gene sequence data has not been registered.